Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SP9P0CG40 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SP9P0CG40 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SP9P0CG40 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SP9P0CG40 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.13■□□□□ 0.97
SP9P0CG40 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.13■□□□□ 0.97
SP9P0CG40 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.13■□□□□ 0.97
SP9P0CG40 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.13■□□□□ 0.97
SP9P0CG40 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SP9P0CG40 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SP9P0CG40 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SP9P0CG40 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.12■□□□□ 0.97
SP9P0CG40 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SP9P0CG40 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.12■□□□□ 0.97
SP9P0CG40 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.11■□□□□ 0.97
SP9P0CG40 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
SP9P0CG40 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.11■□□□□ 0.97
SP9P0CG40 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.11■□□□□ 0.97
SP9P0CG40 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SP9P0CG40 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.11■□□□□ 0.97
SP9P0CG40 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.11■□□□□ 0.97
SP9P0CG40 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.11■□□□□ 0.97
SP9P0CG40 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SP9P0CG40 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.11■□□□□ 0.97
SP9P0CG40 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SP9P0CG40 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.1■□□□□ 0.97
SP9P0CG40 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SP9P0CG40 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 KRT17P2-201ENST00000300992 1314 ntBASIC21.1■□□□□ 0.97
SP9P0CG40 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.1■□□□□ 0.97
SP9P0CG40 LINC01960-201ENST00000563759 1884 ntBASIC21.1■□□□□ 0.97
SP9P0CG40 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.1■□□□□ 0.97
SP9P0CG40 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.1■□□□□ 0.97
SP9P0CG40 AC069544.1-201ENST00000609399 999 ntBASIC21.1■□□□□ 0.97
SP9P0CG40 AC133561.5-201ENST00000635547 218 ntBASIC21.1■□□□□ 0.97
SP9P0CG40 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SP9P0CG40 AC092368.3-202ENST00000574180 1591 ntBASIC21.1■□□□□ 0.97
SP9P0CG40 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SP9P0CG40 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SP9P0CG40 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.09■□□□□ 0.97
SP9P0CG40 AC012618.2-201ENST00000428058 849 ntBASIC21.09■□□□□ 0.97
SP9P0CG40 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.09■□□□□ 0.97
SP9P0CG40 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.09■□□□□ 0.97
SP9P0CG40 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.09■□□□□ 0.97
SP9P0CG40 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SP9P0CG40 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.09■□□□□ 0.97
SP9P0CG40 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.09■□□□□ 0.97
SP9P0CG40 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SP9P0CG40 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.09■□□□□ 0.97
SP9P0CG40 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.08■□□□□ 0.97
SP9P0CG40 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.08■□□□□ 0.97
SP9P0CG40 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SP9P0CG40 TSPY7P-201ENST00000431358 1114 ntBASIC21.08■□□□□ 0.97
SP9P0CG40 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SP9P0CG40 LINC00526-201ENST00000581067 1875 ntBASIC21.08■□□□□ 0.97
SP9P0CG40 AC233702.5-201ENST00000584107 538 ntBASIC21.08■□□□□ 0.97
SP9P0CG40 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms