Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CTSBP07858 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.13■□□□□ 0.81
CTSBP07858 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 AC026185.1-201ENST00000445748 174 ntBASIC20.13■□□□□ 0.81
CTSBP07858 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.13■□□□□ 0.81
CTSBP07858 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.13■□□□□ 0.81
CTSBP07858 AC012676.1-201ENST00000574705 1949 ntBASIC20.13■□□□□ 0.81
CTSBP07858 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTSBP07858 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.13■□□□□ 0.81
CTSBP07858 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.12■□□□□ 0.81
CTSBP07858 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CTSBP07858 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.12■□□□□ 0.81
CTSBP07858 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.12■□□□□ 0.81
CTSBP07858 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.12■□□□□ 0.81
CTSBP07858 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CTSBP07858 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTSBP07858 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSBP07858 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.11■□□□□ 0.81
CTSBP07858 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSBP07858 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSBP07858 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CTSBP07858 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSBP07858 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTSBP07858 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSBP07858 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
CTSBP07858 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.11■□□□□ 0.81
CTSBP07858 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CTSBP07858 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.1■□□□□ 0.81
CTSBP07858 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CTSBP07858 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.1■□□□□ 0.81
CTSBP07858 CNN2P6-201ENST00000439038 900 ntBASIC20.1■□□□□ 0.81
CTSBP07858 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.1■□□□□ 0.81
CTSBP07858 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.1■□□□□ 0.81
CTSBP07858 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.1■□□□□ 0.81
CTSBP07858 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.1■□□□□ 0.81
CTSBP07858 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 AL050303.2-201ENST00000619798 666 ntBASIC20.1■□□□□ 0.81
CTSBP07858 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CTSBP07858 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTSBP07858 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.1■□□□□ 0.81
CTSBP07858 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.09■□□□□ 0.81
CTSBP07858 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CTSBP07858 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.09■□□□□ 0.81
CTSBP07858 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.09■□□□□ 0.81
CTSBP07858 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.09■□□□□ 0.81
CTSBP07858 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.09■□□□□ 0.81
CTSBP07858 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.09■□□□□ 0.81
CTSBP07858 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.09■□□□□ 0.81
CTSBP07858 KRT18P20-201ENST00000548986 1279 ntBASIC20.09■□□□□ 0.81
CTSBP07858 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 C11orf96-202ENST00000528572 1834 ntBASIC20.09■□□□□ 0.81
CTSBP07858 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTSBP07858 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms