Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM3P06753 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TPM3P06753 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TPM3P06753 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TPM3P06753 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
TPM3P06753 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.64■■□□□ 1.37
TPM3P06753 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
TPM3P06753 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.64■■□□□ 1.37
TPM3P06753 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TPM3P06753 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.63■■□□□ 1.37
TPM3P06753 OR7E47P-201ENST00000546390 1422 ntBASIC23.63■■□□□ 1.37
TPM3P06753 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.63■■□□□ 1.37
TPM3P06753 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.63■■□□□ 1.37
TPM3P06753 AL031602.1-201ENST00000633169 911 ntBASIC23.63■■□□□ 1.37
TPM3P06753 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
TPM3P06753 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
TPM3P06753 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.63■■□□□ 1.37
TPM3P06753 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TPM3P06753 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.63■■□□□ 1.37
TPM3P06753 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.62■■□□□ 1.37
TPM3P06753 Z92544.1-202ENST00000571933 1220 ntBASIC23.62■■□□□ 1.37
TPM3P06753 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.62■■□□□ 1.37
TPM3P06753 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TPM3P06753 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TPM3P06753 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TPM3P06753 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
TPM3P06753 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TPM3P06753 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.61■■□□□ 1.37
TPM3P06753 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.61■■□□□ 1.37
TPM3P06753 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TPM3P06753 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.61■■□□□ 1.37
TPM3P06753 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TPM3P06753 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.61■■□□□ 1.37
TPM3P06753 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.61■■□□□ 1.37
TPM3P06753 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.61■■□□□ 1.37
TPM3P06753 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.61■■□□□ 1.37
TPM3P06753 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TPM3P06753 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.61■■□□□ 1.37
TPM3P06753 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.61■■□□□ 1.37
TPM3P06753 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.61■■□□□ 1.37
TPM3P06753 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TPM3P06753 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TPM3P06753 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.61■■□□□ 1.37
TPM3P06753 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
TPM3P06753 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TPM3P06753 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TPM3P06753 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.6■■□□□ 1.37
TPM3P06753 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TPM3P06753 AC241377.3-202ENST00000626088 1088 ntBASIC23.6■■□□□ 1.37
TPM3P06753 AC241585.3-202ENST00000628937 1088 ntBASIC23.6■■□□□ 1.37
TPM3P06753 AC245100.8-202ENST00000629247 1058 ntBASIC23.6■■□□□ 1.37
TPM3P06753 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.6■■□□□ 1.37
TPM3P06753 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TPM3P06753 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TPM3P06753 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TPM3P06753 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TPM3P06753 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.59■■□□□ 1.37
TPM3P06753 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.59■■□□□ 1.37
TPM3P06753 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TPM3P06753 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.59■■□□□ 1.37
TPM3P06753 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.59■■□□□ 1.37
TPM3P06753 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TPM3P06753 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
TPM3P06753 AC010997.5-201ENST00000609182 354 ntBASIC23.59■■□□□ 1.37
TPM3P06753 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TPM3P06753 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.59■■□□□ 1.37
TPM3P06753 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TPM3P06753 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TPM3P06753 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.59■■□□□ 1.37
TPM3P06753 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TPM3P06753 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
TPM3P06753 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.58■■□□□ 1.37
TPM3P06753 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
TPM3P06753 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.58■■□□□ 1.37
TPM3P06753 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.58■■□□□ 1.37
TPM3P06753 AL049796.1-201ENST00000565336 1766 ntBASIC23.58■■□□□ 1.37
TPM3P06753 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TPM3P06753 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TPM3P06753 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms