Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PKD1P6-201ENST00000343738 4769 ntBASIC25.36■■□□□ 1.65
APPP05067 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
APPP05067 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.35■■□□□ 1.65
APPP05067 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.35■■□□□ 1.65
APPP05067 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.35■■□□□ 1.65
APPP05067 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.35■■□□□ 1.65
APPP05067 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.35■■□□□ 1.65
APPP05067 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
APPP05067 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
APPP05067 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.34■■□□□ 1.65
APPP05067 AC016769.1-201ENST00000409132 1010 ntBASIC25.34■■□□□ 1.65
APPP05067 EEF1DP3-203ENST00000566025 782 ntBASIC25.34■■□□□ 1.65
APPP05067 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.34■■□□□ 1.65
APPP05067 AP001160.3-201ENST00000601484 763 ntBASIC25.34■■□□□ 1.65
APPP05067 AC053503.5-201ENST00000601508 636 ntBASIC25.34■■□□□ 1.65
APPP05067 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
APPP05067 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.34■■□□□ 1.65
APPP05067 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
APPP05067 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
APPP05067 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
APPP05067 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
APPP05067 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
APPP05067 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.33■■□□□ 1.65
APPP05067 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.33■■□□□ 1.65
APPP05067 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.33■■□□□ 1.65
APPP05067 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
APPP05067 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.33■■□□□ 1.65
APPP05067 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
APPP05067 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.33■■□□□ 1.65
APPP05067 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.33■■□□□ 1.64
APPP05067 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
APPP05067 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APPP05067 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
APPP05067 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APPP05067 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.32■■□□□ 1.64
APPP05067 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APPP05067 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
APPP05067 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
APPP05067 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.31■■□□□ 1.64
APPP05067 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
APPP05067 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
APPP05067 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
APPP05067 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.31■■□□□ 1.64
APPP05067 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.31■■□□□ 1.64
APPP05067 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APPP05067 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APPP05067 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.31■■□□□ 1.64
APPP05067 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.31■■□□□ 1.64
APPP05067 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
APPP05067 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.3■■□□□ 1.64
APPP05067 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.3■■□□□ 1.64
APPP05067 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.3■■□□□ 1.64
APPP05067 AC138907.5-202ENST00000569484 235 ntBASIC25.3■■□□□ 1.64
APPP05067 AL137784.2-201ENST00000607332 1000 ntBASIC25.3■■□□□ 1.64
APPP05067 AC092437.1-201ENST00000624794 1048 ntBASIC25.3■■□□□ 1.64
APPP05067 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.3■■□□□ 1.64
APPP05067 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.3■■□□□ 1.64
APPP05067 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
APPP05067 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
APPP05067 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
APPP05067 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
APPP05067 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.29■■□□□ 1.64
APPP05067 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 AC004911.1-201ENST00000416316 871 ntBASIC25.29■■□□□ 1.64
APPP05067 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.29■■□□□ 1.64
APPP05067 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
APPP05067 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
APPP05067 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
APPP05067 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
APPP05067 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.28■■□□□ 1.64
APPP05067 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms