Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 pRNA.6-201ENST00000610482 90 ntBASIC18.93■□□□□ 0.62
HLA-DPB1P04440 pRNA.5-201ENST00000612139 90 ntBASIC18.93■□□□□ 0.62
HLA-DPB1P04440 pRNA.11-201ENST00000618423 90 ntBASIC18.93■□□□□ 0.62
HLA-DPB1P04440 pRNA.13-201ENST00000619112 90 ntBASIC18.93■□□□□ 0.62
HLA-DPB1P04440 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.93■□□□□ 0.62
HLA-DPB1P04440 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DPB1P04440 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 FEM1AP1-201ENST00000431297 1995 ntBASIC18.92■□□□□ 0.62
HLA-DPB1P04440 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPB1P04440 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 AC092171.4-201ENST00000609130 632 ntBASIC18.91■□□□□ 0.62
HLA-DPB1P04440 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPB1P04440 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 SYT6-210ENST00000641643 1587 ntBASIC18.9■□□□□ 0.62
HLA-DPB1P04440 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DPB1P04440 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 MIR3181-201ENST00000578512 73 ntBASIC18.89■□□□□ 0.61
HLA-DPB1P04440 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPB1P04440 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPB1P04440 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms