Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MT-ND1P03886 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MT-ND1P03886 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND1P03886 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND1P03886 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.88■□□□□ 0.77
MT-ND1P03886 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MT-ND1P03886 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND1P03886 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MT-ND1P03886 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.87■□□□□ 0.77
MT-ND1P03886 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.87■□□□□ 0.77
MT-ND1P03886 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.87■□□□□ 0.77
MT-ND1P03886 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND1P03886 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MT-ND1P03886 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND1P03886 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND1P03886 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
MT-ND1P03886 AL049796.1-201ENST00000565336 1766 ntBASIC19.86■□□□□ 0.77
MT-ND1P03886 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 GUSBP5-201ENST00000418136 578 ntBASIC19.86■□□□□ 0.77
MT-ND1P03886 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND1P03886 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND1P03886 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MT-ND1P03886 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND1P03886 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND1P03886 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND1P03886 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MT-ND1P03886 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND1P03886 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND1P03886 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
MT-ND1P03886 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.85■□□□□ 0.77
MT-ND1P03886 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
MT-ND1P03886 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MT-ND1P03886 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND1P03886 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.84■□□□□ 0.77
MT-ND1P03886 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.84■□□□□ 0.77
MT-ND1P03886 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
MT-ND1P03886 AL356740.2-201ENST00000601559 647 ntBASIC19.84■□□□□ 0.77
MT-ND1P03886 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND1P03886 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
MT-ND1P03886 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MT-ND1P03886 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MT-ND1P03886 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MT-ND1P03886 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND1P03886 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND1P03886 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND1P03886 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND1P03886 OXCT2P1-201ENST00000447263 1535 ntBASIC19.83■□□□□ 0.77
MT-ND1P03886 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.83■□□□□ 0.77
MT-ND1P03886 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
MT-ND1P03886 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MT-ND1P03886 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND1P03886 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
MT-ND1P03886 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND1P03886 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.83■□□□□ 0.76
MT-ND1P03886 AC007952.6-201ENST00000573168 2673 ntBASIC19.83■□□□□ 0.76
MT-ND1P03886 AC003957.1-201ENST00000625108 2673 ntBASIC19.83■□□□□ 0.76
MT-ND1P03886 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND1P03886 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND1P03886 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND1P03886 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND1P03886 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms