Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.16■■□□□ 1.3
CHRNA1P02708 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CHRNA1P02708 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CHRNA1P02708 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
CHRNA1P02708 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.16■■□□□ 1.3
CHRNA1P02708 AL591742.1-201ENST00000604433 565 ntBASIC23.16■■□□□ 1.3
CHRNA1P02708 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHRNA1P02708 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRNA1P02708 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRNA1P02708 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CHRNA1P02708 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.15■■□□□ 1.3
CHRNA1P02708 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.15■■□□□ 1.3
CHRNA1P02708 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.15■■□□□ 1.3
CHRNA1P02708 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.15■■□□□ 1.3
CHRNA1P02708 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.15■■□□□ 1.3
CHRNA1P02708 RNA5SP413-201ENST00000516373 109 ntBASIC23.15■■□□□ 1.3
CHRNA1P02708 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.15■■□□□ 1.3
CHRNA1P02708 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRNA1P02708 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.14■■□□□ 1.3
CHRNA1P02708 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHRNA1P02708 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
CHRNA1P02708 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHRNA1P02708 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.14■■□□□ 1.3
CHRNA1P02708 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
CHRNA1P02708 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.14■■□□□ 1.29
CHRNA1P02708 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHRNA1P02708 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.14■■□□□ 1.29
CHRNA1P02708 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.14■■□□□ 1.29
CHRNA1P02708 AL162412.1-201ENST00000567129 965 ntBASIC23.14■■□□□ 1.29
CHRNA1P02708 AC243732.1-201ENST00000612648 864 ntBASIC23.14■■□□□ 1.29
CHRNA1P02708 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CHRNA1P02708 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRNA1P02708 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.14■■□□□ 1.29
CHRNA1P02708 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CHRNA1P02708 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRNA1P02708 AC092053.2-201ENST00000640557 1818 ntBASIC23.13■■□□□ 1.29
CHRNA1P02708 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRNA1P02708 POU5F1P3-201ENST00000428824 1078 ntBASIC23.13■■□□□ 1.29
CHRNA1P02708 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CHRNA1P02708 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.13■■□□□ 1.29
CHRNA1P02708 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
CHRNA1P02708 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.13■■□□□ 1.29
CHRNA1P02708 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRNA1P02708 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRNA1P02708 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHRNA1P02708 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.12■■□□□ 1.29
CHRNA1P02708 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRNA1P02708 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRNA1P02708 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.12■■□□□ 1.29
CHRNA1P02708 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.12■■□□□ 1.29
CHRNA1P02708 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.12■■□□□ 1.29
CHRNA1P02708 AC010980.2-201ENST00000587099 1412 ntBASIC23.12■■□□□ 1.29
CHRNA1P02708 AC083880.1-201ENST00000608266 535 ntBASIC23.12■■□□□ 1.29
CHRNA1P02708 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.12■■□□□ 1.29
CHRNA1P02708 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.12■■□□□ 1.29
CHRNA1P02708 MYC-209ENST00000641252 345 ntBASIC23.12■■□□□ 1.29
CHRNA1P02708 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.12■■□□□ 1.29
CHRNA1P02708 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.12■■□□□ 1.29
CHRNA1P02708 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRNA1P02708 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHRNA1P02708 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHRNA1P02708 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHRNA1P02708 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 RARRES2P4-201ENST00000514074 484 ntBASIC23.11■■□□□ 1.29
CHRNA1P02708 AC008687.6-201ENST00000596318 630 ntBASIC23.11■■□□□ 1.29
CHRNA1P02708 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.11■■□□□ 1.29
CHRNA1P02708 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.11■■□□□ 1.29
CHRNA1P02708 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRNA1P02708 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRNA1P02708 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHRNA1P02708 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHRNA1P02708 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRNA1P02708 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.1■■□□□ 1.29
CHRNA1P02708 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHRNA1P02708 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.1■■□□□ 1.29
CHRNA1P02708 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CHRNA1P02708 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRNA1P02708 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHRNA1P02708 AC080038.3-201ENST00000623346 1952 ntBASIC23.1■■□□□ 1.29
CHRNA1P02708 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRNA1P02708 AC026471.6-201ENST00000622954 1905 ntBASIC23.1■■□□□ 1.29
CHRNA1P02708 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.09■■□□□ 1.29
CHRNA1P02708 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CHRNA1P02708 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHRNA1P02708 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHRNA1P02708 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms