Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.67■■□□□ 1.7
COL1A1P02452 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
COL1A1P02452 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL1A1P02452 AC068338.2-201ENST00000563278 1430 ntBASIC25.67■■□□□ 1.7
COL1A1P02452 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL1A1P02452 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL1A1P02452 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
COL1A1P02452 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.67■■□□□ 1.7
COL1A1P02452 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL1A1P02452 AC010542.4-201ENST00000563151 1910 ntBASIC25.67■■□□□ 1.7
COL1A1P02452 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.67■■□□□ 1.7
COL1A1P02452 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.67■■□□□ 1.7
COL1A1P02452 TERF1P5-201ENST00000477545 1207 ntBASIC25.66■■□□□ 1.7
COL1A1P02452 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
COL1A1P02452 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A1P02452 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A1P02452 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
COL1A1P02452 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL1A1P02452 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.66■■□□□ 1.7
COL1A1P02452 FAM201B-201ENST00000458407 597 ntBASIC25.66■■□□□ 1.7
COL1A1P02452 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.66■■□□□ 1.7
COL1A1P02452 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.66■■□□□ 1.7
COL1A1P02452 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.66■■□□□ 1.7
COL1A1P02452 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A1P02452 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A1P02452 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.65■■□□□ 1.7
COL1A1P02452 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.65■■□□□ 1.7
COL1A1P02452 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.65■■□□□ 1.7
COL1A1P02452 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.65■■□□□ 1.7
COL1A1P02452 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.65■■□□□ 1.7
COL1A1P02452 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A1P02452 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A1P02452 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A1P02452 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL1A1P02452 AC105036.2-201ENST00000569468 176 ntBASIC25.65■■□□□ 1.7
COL1A1P02452 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL1A1P02452 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
COL1A1P02452 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
COL1A1P02452 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL1A1P02452 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL1A1P02452 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A1P02452 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A1P02452 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A1P02452 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.64■■□□□ 1.69
COL1A1P02452 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.64■■□□□ 1.69
COL1A1P02452 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.64■■□□□ 1.69
COL1A1P02452 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL1A1P02452 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.63■■□□□ 1.69
COL1A1P02452 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
COL1A1P02452 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.63■■□□□ 1.69
COL1A1P02452 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.63■■□□□ 1.69
COL1A1P02452 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.63■■□□□ 1.69
COL1A1P02452 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL1A1P02452 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL1A1P02452 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
COL1A1P02452 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.62■■□□□ 1.69
COL1A1P02452 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL1A1P02452 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
COL1A1P02452 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.62■■□□□ 1.69
COL1A1P02452 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.62■■□□□ 1.69
COL1A1P02452 KRT16P2-201ENST00000414673 1423 ntBASIC25.62■■□□□ 1.69
COL1A1P02452 RBM17P2-201ENST00000616397 1405 ntBASIC25.62■■□□□ 1.69
COL1A1P02452 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.62■■□□□ 1.69
COL1A1P02452 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.61■■□□□ 1.69
COL1A1P02452 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
COL1A1P02452 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.61■■□□□ 1.69
COL1A1P02452 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.61■■□□□ 1.69
COL1A1P02452 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL1A1P02452 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A1P02452 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A1P02452 AC093787.1-201ENST00000450396 207 ntBASIC25.6■■□□□ 1.69
COL1A1P02452 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.6■■□□□ 1.69
COL1A1P02452 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.6■■□□□ 1.69
COL1A1P02452 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
COL1A1P02452 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.6■■□□□ 1.69
COL1A1P02452 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A1P02452 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A1P02452 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
COL1A1P02452 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A1P02452 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL1A1P02452 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
COL1A1P02452 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms