Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SIX6O95475 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.68■□□□□ 0.42
SIX6O95475 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SIX6O95475 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.68■□□□□ 0.42
SIX6O95475 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.68■□□□□ 0.42
SIX6O95475 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX6O95475 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX6O95475 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIX6O95475 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX6O95475 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SIX6O95475 AL592293.1-201ENST00000502889 1188 ntBASIC17.67■□□□□ 0.42
SIX6O95475 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX6O95475 MIR6765-201ENST00000614092 87 ntBASIC17.67■□□□□ 0.42
SIX6O95475 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIX6O95475 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX6O95475 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX6O95475 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX6O95475 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX6O95475 FP325331.1-202ENST00000623531 1380 ntBASIC17.66■□□□□ 0.42
SIX6O95475 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX6O95475 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX6O95475 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SIX6O95475 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SIX6O95475 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SIX6O95475 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 AC112907.3-201ENST00000577781 2400 ntBASIC17.66■□□□□ 0.42
SIX6O95475 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SIX6O95475 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SIX6O95475 C17orf82-201ENST00000623772 1530 ntBASIC17.66■□□□□ 0.42
SIX6O95475 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SIX6O95475 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX6O95475 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SIX6O95475 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SIX6O95475 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX6O95475 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX6O95475 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX6O95475 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX6O95475 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX6O95475 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX6O95475 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SIX6O95475 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX6O95475 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SIX6O95475 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX6O95475 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX6O95475 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIX6O95475 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIX6O95475 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.64■□□□□ 0.42
SIX6O95475 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX6O95475 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX6O95475 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIX6O95475 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX6O95475 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms