Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC28.36■■■□□ 2.13
LTN1O94822 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LTN1O94822 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.36■■■□□ 2.13
LTN1O94822 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LTN1O94822 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LTN1O94822 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC28.36■■■□□ 2.13
LTN1O94822 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LTN1O94822 AC003102.1-202ENST00000563394 1796 ntBASIC28.35■■■□□ 2.13
LTN1O94822 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC28.35■■■□□ 2.13
LTN1O94822 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LTN1O94822 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.35■■■□□ 2.13
LTN1O94822 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LTN1O94822 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LTN1O94822 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
LTN1O94822 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LTN1O94822 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC28.35■■■□□ 2.13
LTN1O94822 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
LTN1O94822 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC28.34■■■□□ 2.13
LTN1O94822 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LTN1O94822 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LTN1O94822 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
LTN1O94822 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.34■■■□□ 2.13
LTN1O94822 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LTN1O94822 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC28.34■■■□□ 2.13
LTN1O94822 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
LTN1O94822 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.34■■■□□ 2.13
LTN1O94822 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
LTN1O94822 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
LTN1O94822 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC28.33■■■□□ 2.13
LTN1O94822 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
LTN1O94822 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC28.33■■■□□ 2.13
LTN1O94822 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC28.33■■■□□ 2.13
LTN1O94822 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC28.33■■■□□ 2.13
LTN1O94822 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.33■■■□□ 2.13
LTN1O94822 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC28.33■■■□□ 2.13
LTN1O94822 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC28.33■■■□□ 2.13
LTN1O94822 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
LTN1O94822 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.32■■■□□ 2.12
LTN1O94822 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LTN1O94822 SERPINH1P1-201ENST00000419794 1249 ntBASIC28.32■■■□□ 2.12
LTN1O94822 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.32■■■□□ 2.12
LTN1O94822 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC28.32■■■□□ 2.12
LTN1O94822 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
LTN1O94822 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
LTN1O94822 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC28.32■■■□□ 2.12
LTN1O94822 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
LTN1O94822 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LTN1O94822 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC28.32■■■□□ 2.12
LTN1O94822 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LTN1O94822 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
LTN1O94822 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LTN1O94822 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LTN1O94822 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC28.31■■■□□ 2.12
LTN1O94822 UNC93B5-201ENST00000530315 699 ntBASIC28.31■■■□□ 2.12
LTN1O94822 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LTN1O94822 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LTN1O94822 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC28.3■■■□□ 2.12
LTN1O94822 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.3■■■□□ 2.12
LTN1O94822 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
LTN1O94822 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LTN1O94822 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LTN1O94822 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
LTN1O94822 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LTN1O94822 KRT18P29-201ENST00000397031 1267 ntBASIC28.29■■■□□ 2.12
LTN1O94822 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
LTN1O94822 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC28.29■■■□□ 2.12
LTN1O94822 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC28.29■■■□□ 2.12
LTN1O94822 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
LTN1O94822 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LTN1O94822 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LTN1O94822 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC28.29■■■□□ 2.12
LTN1O94822 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
LTN1O94822 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC28.29■■■□□ 2.12
LTN1O94822 GCSHP5-201ENST00000443090 522 ntBASIC28.29■■■□□ 2.12
LTN1O94822 KRT17P1-201ENST00000399211 1546 ntBASIC28.29■■■□□ 2.12
LTN1O94822 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC28.28■■■□□ 2.12
LTN1O94822 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LTN1O94822 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LTN1O94822 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC28.28■■■□□ 2.12
LTN1O94822 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC28.28■■■□□ 2.12
LTN1O94822 AC091799.1-201ENST00000422823 811 ntBASIC28.28■■■□□ 2.12
LTN1O94822 AC097658.1-201ENST00000475555 843 ntBASIC28.28■■■□□ 2.12
LTN1O94822 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
LTN1O94822 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC28.27■■■□□ 2.12
LTN1O94822 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
LTN1O94822 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
LTN1O94822 AL355472.2-201ENST00000422958 438 ntBASIC28.27■■■□□ 2.12
LTN1O94822 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC28.27■■■□□ 2.12
LTN1O94822 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LTN1O94822 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
LTN1O94822 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms