Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP200O75643 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRNP200O75643 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.33■□□□□ 0.84
SNRNP200O75643 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SNRNP200O75643 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.32■□□□□ 0.84
SNRNP200O75643 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP200O75643 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 KRT18P20-201ENST00000548986 1279 ntBASIC20.32■□□□□ 0.84
SNRNP200O75643 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP200O75643 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP200O75643 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRNP200O75643 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNRNP200O75643 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.32■□□□□ 0.84
SNRNP200O75643 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.32■□□□□ 0.84
SNRNP200O75643 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.32■□□□□ 0.84
SNRNP200O75643 AL137784.2-201ENST00000607332 1000 ntBASIC20.32■□□□□ 0.84
SNRNP200O75643 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRNP200O75643 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNRNP200O75643 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 MIR663A-201ENST00000385250 93 ntBASIC20.31■□□□□ 0.84
SNRNP200O75643 KRT18P11-201ENST00000435214 1283 ntBASIC20.31■□□□□ 0.84
SNRNP200O75643 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRNP200O75643 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRNP200O75643 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRNP200O75643 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNRNP200O75643 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SNRNP200O75643 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRNP200O75643 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SNRNP200O75643 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRNP200O75643 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 FBXW4P1-201ENST00000426721 2239 ntBASIC20.3■□□□□ 0.84
SNRNP200O75643 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SNRNP200O75643 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNRNP200O75643 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.3■□□□□ 0.84
SNRNP200O75643 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP200O75643 SLC7A5P2-201ENST00000553010 536 ntBASIC20.3■□□□□ 0.84
SNRNP200O75643 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.3■□□□□ 0.84
SNRNP200O75643 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP200O75643 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
SNRNP200O75643 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
SNRNP200O75643 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP200O75643 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP200O75643 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRNP200O75643 RARRES2P11-201ENST00000635158 484 ntBASIC20.29■□□□□ 0.84
SNRNP200O75643 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.29■□□□□ 0.84
SNRNP200O75643 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP200O75643 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRNP200O75643 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP200O75643 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SNRNP200O75643 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 AC061975.6-201ENST00000579045 1553 ntBASIC20.28■□□□□ 0.84
SNRNP200O75643 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SNRNP200O75643 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP200O75643 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms