Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PMPCBO75439 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PMPCBO75439 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PMPCBO75439 AL137060.1-201ENST00000618151 2648 ntBASIC21.46■■□□□ 1.03
PMPCBO75439 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.46■■□□□ 1.03
PMPCBO75439 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PMPCBO75439 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.46■■□□□ 1.03
PMPCBO75439 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PMPCBO75439 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMPCBO75439 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.46■■□□□ 1.03
PMPCBO75439 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.46■■□□□ 1.03
PMPCBO75439 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
PMPCBO75439 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.45■■□□□ 1.02
PMPCBO75439 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PMPCBO75439 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PMPCBO75439 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.45■■□□□ 1.02
PMPCBO75439 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.45■■□□□ 1.02
PMPCBO75439 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.45■■□□□ 1.02
PMPCBO75439 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.45■■□□□ 1.02
PMPCBO75439 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMPCBO75439 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PMPCBO75439 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PMPCBO75439 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PMPCBO75439 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMPCBO75439 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.44■■□□□ 1.02
PMPCBO75439 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMPCBO75439 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.44■■□□□ 1.02
PMPCBO75439 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMPCBO75439 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.44■■□□□ 1.02
PMPCBO75439 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.44■■□□□ 1.02
PMPCBO75439 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.43■■□□□ 1.02
PMPCBO75439 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PMPCBO75439 LINC02228-203ENST00000641970 1355 ntBASIC21.43■■□□□ 1.02
PMPCBO75439 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PMPCBO75439 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PMPCBO75439 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.43■■□□□ 1.02
PMPCBO75439 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMPCBO75439 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
PMPCBO75439 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMPCBO75439 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PMPCBO75439 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMPCBO75439 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PMPCBO75439 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.42■■□□□ 1.02
PMPCBO75439 YBX1P1-201ENST00000445822 960 ntBASIC21.42■■□□□ 1.02
PMPCBO75439 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.42■■□□□ 1.02
PMPCBO75439 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMPCBO75439 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.42■■□□□ 1.02
PMPCBO75439 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PMPCBO75439 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.42■■□□□ 1.02
PMPCBO75439 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.42■■□□□ 1.02
PMPCBO75439 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.41■■□□□ 1.02
PMPCBO75439 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.41■■□□□ 1.02
PMPCBO75439 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PMPCBO75439 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PMPCBO75439 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 AC079140.4-201ENST00000507448 529 ntBASIC21.41■■□□□ 1.02
PMPCBO75439 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.41■■□□□ 1.02
PMPCBO75439 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.41■■□□□ 1.02
PMPCBO75439 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.41■■□□□ 1.02
PMPCBO75439 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.41■■□□□ 1.02
PMPCBO75439 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMPCBO75439 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.41■■□□□ 1.02
PMPCBO75439 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMPCBO75439 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMPCBO75439 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PMPCBO75439 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.4■■□□□ 1.02
PMPCBO75439 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMPCBO75439 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMPCBO75439 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms