Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR5787-201ENST00000611784 55 ntBASIC19.93■□□□□ 0.78
LDB3O75112 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB3O75112 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.93■□□□□ 0.78
LDB3O75112 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LDB3O75112 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LDB3O75112 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LDB3O75112 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB3O75112 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB3O75112 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.92■□□□□ 0.78
LDB3O75112 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.92■□□□□ 0.78
LDB3O75112 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB3O75112 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.92■□□□□ 0.78
LDB3O75112 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LDB3O75112 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB3O75112 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 AC004854.2-201ENST00000608450 1441 ntBASIC19.92■□□□□ 0.78
LDB3O75112 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB3O75112 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB3O75112 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB3O75112 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB3O75112 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.91■□□□□ 0.78
LDB3O75112 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB3O75112 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.91■□□□□ 0.78
LDB3O75112 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB3O75112 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.91■□□□□ 0.78
LDB3O75112 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.91■□□□□ 0.78
LDB3O75112 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.91■□□□□ 0.78
LDB3O75112 AP004607.4-201ENST00000530158 1459 ntBASIC19.91■□□□□ 0.78
LDB3O75112 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LDB3O75112 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LDB3O75112 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB3O75112 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB3O75112 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
LDB3O75112 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.9■□□□□ 0.78
LDB3O75112 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB3O75112 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.9■□□□□ 0.78
LDB3O75112 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB3O75112 KRT18P61-201ENST00000585825 1298 ntBASIC19.9■□□□□ 0.78
LDB3O75112 NTF6G-201ENST00000591094 616 ntBASIC19.9■□□□□ 0.78
LDB3O75112 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB3O75112 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB3O75112 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.9■□□□□ 0.78
LDB3O75112 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 AC244015.2-201ENST00000616358 1861 ntBASIC19.9■□□□□ 0.78
LDB3O75112 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.9■□□□□ 0.78
LDB3O75112 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB3O75112 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB3O75112 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDB3O75112 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDB3O75112 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDB3O75112 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.89■□□□□ 0.77
LDB3O75112 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB3O75112 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.89■□□□□ 0.77
LDB3O75112 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.89■□□□□ 0.77
LDB3O75112 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.89■□□□□ 0.77
LDB3O75112 EEF1DP3-203ENST00000566025 782 ntBASIC19.89■□□□□ 0.77
LDB3O75112 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.89■□□□□ 0.77
LDB3O75112 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.89■□□□□ 0.77
LDB3O75112 AC104187.1-201ENST00000607510 612 ntBASIC19.89■□□□□ 0.77
LDB3O75112 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.89■□□□□ 0.77
LDB3O75112 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LDB3O75112 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
LDB3O75112 KRT18P5-201ENST00000436075 1291 ntBASIC19.88■□□□□ 0.77
LDB3O75112 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 AL162430.1-201ENST00000480705 870 ntBASIC19.88■□□□□ 0.77
LDB3O75112 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB3O75112 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LDB3O75112 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB3O75112 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.88■□□□□ 0.77
LDB3O75112 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDB3O75112 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.87■□□□□ 0.77
LDB3O75112 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.87■□□□□ 0.77
LDB3O75112 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms