Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCMT2O60294 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCMT2O60294 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCMT2O60294 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.28■□□□□ 0.84
LCMT2O60294 AC004854.2-201ENST00000608450 1441 ntBASIC20.27■□□□□ 0.84
LCMT2O60294 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
LCMT2O60294 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.27■□□□□ 0.84
LCMT2O60294 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.27■□□□□ 0.84
LCMT2O60294 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.27■□□□□ 0.84
LCMT2O60294 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.27■□□□□ 0.84
LCMT2O60294 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.27■□□□□ 0.84
LCMT2O60294 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.27■□□□□ 0.84
LCMT2O60294 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.27■□□□□ 0.84
LCMT2O60294 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.27■□□□□ 0.84
LCMT2O60294 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LCMT2O60294 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCMT2O60294 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LCMT2O60294 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LCMT2O60294 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCMT2O60294 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCMT2O60294 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCMT2O60294 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCMT2O60294 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCMT2O60294 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.26■□□□□ 0.83
LCMT2O60294 NTF6G-201ENST00000591094 616 ntBASIC20.26■□□□□ 0.83
LCMT2O60294 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.26■□□□□ 0.83
LCMT2O60294 AC053503.5-201ENST00000601508 636 ntBASIC20.26■□□□□ 0.83
LCMT2O60294 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.26■□□□□ 0.83
LCMT2O60294 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.25■□□□□ 0.83
LCMT2O60294 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LCMT2O60294 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.25■□□□□ 0.83
LCMT2O60294 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.25■□□□□ 0.83
LCMT2O60294 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.25■□□□□ 0.83
LCMT2O60294 MIR5787-201ENST00000611784 55 ntBASIC20.25■□□□□ 0.83
LCMT2O60294 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LCMT2O60294 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LCMT2O60294 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LCMT2O60294 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LCMT2O60294 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LCMT2O60294 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LCMT2O60294 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCMT2O60294 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCMT2O60294 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
LCMT2O60294 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LCMT2O60294 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.24■□□□□ 0.83
LCMT2O60294 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LCMT2O60294 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCMT2O60294 KRT18P5-201ENST00000436075 1291 ntBASIC20.24■□□□□ 0.83
LCMT2O60294 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.24■□□□□ 0.83
LCMT2O60294 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.24■□□□□ 0.83
LCMT2O60294 AC104187.1-201ENST00000607510 612 ntBASIC20.24■□□□□ 0.83
LCMT2O60294 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.24■□□□□ 0.83
LCMT2O60294 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LCMT2O60294 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCMT2O60294 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LCMT2O60294 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.23■□□□□ 0.83
LCMT2O60294 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.23■□□□□ 0.83
LCMT2O60294 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LCMT2O60294 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.23■□□□□ 0.83
LCMT2O60294 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.23■□□□□ 0.83
LCMT2O60294 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.23■□□□□ 0.83
LCMT2O60294 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.23■□□□□ 0.83
LCMT2O60294 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCMT2O60294 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms