Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 LINC01006-201ENST00000333319 2292 ntBASIC20.49■□□□□ 0.87
PEX1O43933 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX1O43933 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PEX1O43933 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
PEX1O43933 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PEX1O43933 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.48■□□□□ 0.87
PEX1O43933 CA15P2-201ENST00000611168 834 ntBASIC20.48■□□□□ 0.87
PEX1O43933 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PEX1O43933 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX1O43933 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX1O43933 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PEX1O43933 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX1O43933 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PEX1O43933 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.48■□□□□ 0.87
PEX1O43933 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX1O43933 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.47■□□□□ 0.87
PEX1O43933 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX1O43933 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX1O43933 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX1O43933 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PEX1O43933 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PEX1O43933 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX1O43933 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.46■□□□□ 0.87
PEX1O43933 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PEX1O43933 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.46■□□□□ 0.87
PEX1O43933 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 AC099791.1-201ENST00000416440 715 ntBASIC20.46■□□□□ 0.87
PEX1O43933 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.46■□□□□ 0.87
PEX1O43933 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX1O43933 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX1O43933 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
PEX1O43933 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.45■□□□□ 0.86
PEX1O43933 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PEX1O43933 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.45■□□□□ 0.86
PEX1O43933 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX1O43933 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.44■□□□□ 0.86
PEX1O43933 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.44■□□□□ 0.86
PEX1O43933 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PEX1O43933 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.44■□□□□ 0.86
PEX1O43933 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.44■□□□□ 0.86
PEX1O43933 AC233992.3-201ENST00000607491 485 ntBASIC20.44■□□□□ 0.86
PEX1O43933 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 AC144652.1-201ENST00000609974 1624 ntBASIC20.44■□□□□ 0.86
PEX1O43933 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PEX1O43933 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX1O43933 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.43■□□□□ 0.86
PEX1O43933 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PEX1O43933 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PEX1O43933 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX1O43933 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
PEX1O43933 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX1O43933 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms