Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAF3IP2O43734 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
TRAF3IP2O43734 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 AC079140.4-201ENST00000507448 529 ntBASIC18.84■□□□□ 0.61
TRAF3IP2O43734 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 TERF1P2-201ENST00000583350 1212 ntBASIC18.84■□□□□ 0.61
TRAF3IP2O43734 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAF3IP2O43734 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.83■□□□□ 0.61
TRAF3IP2O43734 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAF3IP2O43734 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 EEF1DP3-203ENST00000566025 782 ntBASIC18.82■□□□□ 0.6
TRAF3IP2O43734 CCDC92B-201ENST00000575506 885 ntBASIC18.82■□□□□ 0.6
TRAF3IP2O43734 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TRAF3IP2O43734 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF3IP2O43734 KRT87P-202ENST00000534226 1464 ntBASIC18.81■□□□□ 0.6
TRAF3IP2O43734 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms