Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN6O43657 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TSPAN6O43657 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN6O43657 CROCCP5-201ENST00000436658 830 ntBASIC21.16■□□□□ 0.98
TSPAN6O43657 AC006970.2-201ENST00000450065 779 ntBASIC21.16■□□□□ 0.98
TSPAN6O43657 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN6O43657 EP400NL-214ENST00000641289 2402 ntBASIC21.16■□□□□ 0.98
TSPAN6O43657 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TSPAN6O43657 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN6O43657 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN6O43657 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.15■□□□□ 0.98
TSPAN6O43657 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.15■□□□□ 0.98
TSPAN6O43657 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.15■□□□□ 0.98
TSPAN6O43657 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.15■□□□□ 0.98
TSPAN6O43657 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
TSPAN6O43657 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TSPAN6O43657 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.15■□□□□ 0.98
TSPAN6O43657 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TSPAN6O43657 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.15■□□□□ 0.98
TSPAN6O43657 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN6O43657 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN6O43657 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.15■□□□□ 0.98
TSPAN6O43657 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
TSPAN6O43657 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN6O43657 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TSPAN6O43657 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN6O43657 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN6O43657 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TSPAN6O43657 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TSPAN6O43657 AC007322.1-201ENST00000426983 750 ntBASIC21.14■□□□□ 0.97
TSPAN6O43657 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 SLC7A5P2-201ENST00000553010 536 ntBASIC21.14■□□□□ 0.97
TSPAN6O43657 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.14■□□□□ 0.97
TSPAN6O43657 AC010536.3-201ENST00000620306 533 ntBASIC21.14■□□□□ 0.97
TSPAN6O43657 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.97
TSPAN6O43657 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.14■□□□□ 0.97
TSPAN6O43657 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN6O43657 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TSPAN6O43657 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.13■□□□□ 0.97
TSPAN6O43657 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN6O43657 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TSPAN6O43657 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN6O43657 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.13■□□□□ 0.97
TSPAN6O43657 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.13■□□□□ 0.97
TSPAN6O43657 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TSPAN6O43657 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.13■□□□□ 0.97
TSPAN6O43657 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TSPAN6O43657 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN6O43657 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN6O43657 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN6O43657 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN6O43657 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN6O43657 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN6O43657 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.12■□□□□ 0.97
TSPAN6O43657 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN6O43657 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TSPAN6O43657 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN6O43657 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TSPAN6O43657 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN6O43657 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms