Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
AP3B1O00203 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.36■■□□□ 1.01
AP3B1O00203 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.36■■□□□ 1.01
AP3B1O00203 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
AP3B1O00203 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.36■■□□□ 1.01
AP3B1O00203 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 AF213884.3-201ENST00000563833 479 ntBASIC21.36■■□□□ 1.01
AP3B1O00203 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.36■■□□□ 1.01
AP3B1O00203 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.36■■□□□ 1.01
AP3B1O00203 AL136967.2-201ENST00000623968 743 ntBASIC21.36■■□□□ 1.01
AP3B1O00203 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.36■■□□□ 1.01
AP3B1O00203 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3B1O00203 AC005229.4-201ENST00000610085 2198 ntBASIC21.36■■□□□ 1.01
AP3B1O00203 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.36■■□□□ 1.01
AP3B1O00203 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
AP3B1O00203 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.35■■□□□ 1.01
AP3B1O00203 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
AP3B1O00203 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.35■■□□□ 1.01
AP3B1O00203 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
AP3B1O00203 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.35■■□□□ 1.01
AP3B1O00203 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.35■■□□□ 1.01
AP3B1O00203 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
AP3B1O00203 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
AP3B1O00203 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.35■■□□□ 1.01
AP3B1O00203 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3B1O00203 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.34■■□□□ 1.01
AP3B1O00203 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
AP3B1O00203 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.34■■□□□ 1.01
AP3B1O00203 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.34■■□□□ 1.01
AP3B1O00203 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.34■■□□□ 1.01
AP3B1O00203 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
AP3B1O00203 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
AP3B1O00203 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
AP3B1O00203 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 AL024507.2-201ENST00000606070 2574 ntBASIC21.34■■□□□ 1.01
AP3B1O00203 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3B1O00203 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3B1O00203 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3B1O00203 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
AP3B1O00203 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3B1O00203 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3B1O00203 AL139246.5-201ENST00000606645 996 ntBASIC21.33■■□□□ 1.01
AP3B1O00203 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
AP3B1O00203 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AP3B1O00203 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AP3B1O00203 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.33■■□□□ 1
AP3B1O00203 AL049796.1-201ENST00000565336 1766 ntBASIC21.33■■□□□ 1
AP3B1O00203 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.32■■□□□ 1
AP3B1O00203 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.32■■□□□ 1
AP3B1O00203 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.32■■□□□ 1
AP3B1O00203 AC012414.1-201ENST00000556676 535 ntBASIC21.32■■□□□ 1
AP3B1O00203 AL354811.1-201ENST00000610286 706 ntBASIC21.32■■□□□ 1
AP3B1O00203 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.32■■□□□ 1
AP3B1O00203 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.32■■□□□ 1
AP3B1O00203 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
AP3B1O00203 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3B1O00203 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
AP3B1O00203 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.31■■□□□ 1
AP3B1O00203 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.31■■□□□ 1
AP3B1O00203 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.31■■□□□ 1
AP3B1O00203 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.31■■□□□ 1
AP3B1O00203 AL031432.3-201ENST00000607698 485 ntBASIC21.31■■□□□ 1
AP3B1O00203 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.31■■□□□ 1
AP3B1O00203 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
AP3B1O00203 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms