Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 AC092296.2-201ENST00000589470 999 ntBASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 RAP2CP1-202ENST00000605179 643 ntBASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM256-PLSCR3K7ERE1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 CA15P2-201ENST00000611168 834 ntBASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 AP005212.1-201ENST00000581547 1997 ntBASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 BX323043.1-201ENST00000641006 1765 ntBASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 AFG3L1P-217ENST00000557444 2447 ntBASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 RPS2P7-201ENST00000447334 885 ntBASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 AC011551.1-201ENST00000614101 683 ntBASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 AC018445.3-201ENST00000624177 1945 ntBASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 LINC01529-204ENST00000636474 1715 ntBASIC13.37□□□□□ -0.27
TMEM256-PLSCR3K7ERE1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms