Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC188H7C350 AP005212.1-201ENST00000581547 1997 ntBASIC21.98■■□□□ 1.11
CCDC188H7C350 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC188H7C350 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC188H7C350 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.98■■□□□ 1.11
CCDC188H7C350 UNC93B8-201ENST00000511903 705 ntBASIC21.98■■□□□ 1.11
CCDC188H7C350 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC188H7C350 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC188H7C350 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC188H7C350 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.98■■□□□ 1.11
CCDC188H7C350 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC188H7C350 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC188H7C350 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC188H7C350 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC188H7C350 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCDC188H7C350 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CCDC188H7C350 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CCDC188H7C350 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.97■■□□□ 1.11
CCDC188H7C350 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.97■■□□□ 1.11
CCDC188H7C350 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.97■■□□□ 1.11
CCDC188H7C350 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CCDC188H7C350 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.97■■□□□ 1.11
CCDC188H7C350 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC188H7C350 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC188H7C350 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CCDC188H7C350 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC188H7C350 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC188H7C350 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC188H7C350 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC188H7C350 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CCDC188H7C350 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
CCDC188H7C350 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC188H7C350 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC188H7C350 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCDC188H7C350 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC188H7C350 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC188H7C350 AC010525.1-201ENST00000585559 441 ntBASIC21.95■■□□□ 1.1
CCDC188H7C350 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC188H7C350 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
CCDC188H7C350 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCDC188H7C350 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCDC188H7C350 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC188H7C350 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC188H7C350 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 AC009299.2-201ENST00000482477 511 ntBASIC21.94■■□□□ 1.1
CCDC188H7C350 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC188H7C350 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC188H7C350 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.94■■□□□ 1.1
CCDC188H7C350 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC188H7C350 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC188H7C350 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC188H7C350 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC188H7C350 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC188H7C350 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC188H7C350 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC188H7C350 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CCDC188H7C350 AC092171.4-201ENST00000609130 632 ntBASIC21.93■■□□□ 1.1
CCDC188H7C350 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC188H7C350 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms