Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.05■□□□□ 0.96
CFAP99D6REC4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.05■□□□□ 0.96
CFAP99D6REC4 CCDC92B-201ENST00000575506 885 ntBASIC21.05■□□□□ 0.96
CFAP99D6REC4 TERF1P2-201ENST00000583350 1212 ntBASIC21.05■□□□□ 0.96
CFAP99D6REC4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CFAP99D6REC4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CFAP99D6REC4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CFAP99D6REC4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CFAP99D6REC4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CFAP99D6REC4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CFAP99D6REC4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP99D6REC4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CFAP99D6REC4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP99D6REC4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.04■□□□□ 0.96
CFAP99D6REC4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.04■□□□□ 0.96
CFAP99D6REC4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP99D6REC4 MIR6821-201ENST00000617625 74 ntBASIC21.04■□□□□ 0.96
CFAP99D6REC4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.04■□□□□ 0.96
CFAP99D6REC4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP99D6REC4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.04■□□□□ 0.96
CFAP99D6REC4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP99D6REC4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP99D6REC4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP99D6REC4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CFAP99D6REC4 AC003102.1-202ENST00000563394 1796 ntBASIC21.03■□□□□ 0.96
CFAP99D6REC4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP99D6REC4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP99D6REC4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP99D6REC4 KRT18P14-201ENST00000534205 1250 ntBASIC21.03■□□□□ 0.96
CFAP99D6REC4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.03■□□□□ 0.96
CFAP99D6REC4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.03■□□□□ 0.96
CFAP99D6REC4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.03■□□□□ 0.96
CFAP99D6REC4 AC026471.6-201ENST00000622954 1905 ntBASIC21.03■□□□□ 0.96
CFAP99D6REC4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.03■□□□□ 0.96
CFAP99D6REC4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP99D6REC4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CFAP99D6REC4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.02■□□□□ 0.96
CFAP99D6REC4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
CFAP99D6REC4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CFAP99D6REC4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP99D6REC4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CFAP99D6REC4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CFAP99D6REC4 AC010542.4-201ENST00000563151 1910 ntBASIC21.02■□□□□ 0.95
CFAP99D6REC4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CFAP99D6REC4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CFAP99D6REC4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
CFAP99D6REC4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP99D6REC4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP99D6REC4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP99D6REC4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP99D6REC4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.01■□□□□ 0.95
CFAP99D6REC4 RARRES2P6-201ENST00000567333 442 ntBASIC21.01■□□□□ 0.95
CFAP99D6REC4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.01■□□□□ 0.95
CFAP99D6REC4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP99D6REC4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CFAP99D6REC4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CFAP99D6REC4 KRT87P-202ENST00000534226 1464 ntBASIC21.01■□□□□ 0.95
CFAP99D6REC4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21■□□□□ 0.95
CFAP99D6REC4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CFAP99D6REC4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21■□□□□ 0.95
CFAP99D6REC4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CFAP99D6REC4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21■□□□□ 0.95
CFAP99D6REC4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21■□□□□ 0.95
CFAP99D6REC4 AC034268.1-201ENST00000441047 882 ntBASIC21■□□□□ 0.95
CFAP99D6REC4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21■□□□□ 0.95
CFAP99D6REC4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21■□□□□ 0.95
CFAP99D6REC4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP99D6REC4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CFAP99D6REC4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CFAP99D6REC4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.99■□□□□ 0.95
CFAP99D6REC4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.99■□□□□ 0.95
CFAP99D6REC4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.99■□□□□ 0.95
CFAP99D6REC4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CFAP99D6REC4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.99■□□□□ 0.95
CFAP99D6REC4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP99D6REC4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms