Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM235A6NFC5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM235A6NFC5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM235A6NFC5 Z92544.1-202ENST00000571933 1220 ntBASIC18.02■□□□□ 0.48
TMEM235A6NFC5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM235A6NFC5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM235A6NFC5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
TMEM235A6NFC5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TMEM235A6NFC5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM235A6NFC5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM235A6NFC5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TMEM235A6NFC5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM235A6NFC5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 AC006455.2-201ENST00000429931 906 ntBASIC18.01■□□□□ 0.47
TMEM235A6NFC5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 pRNA.6-201ENST00000610482 90 ntBASIC18.01■□□□□ 0.47
TMEM235A6NFC5 pRNA.5-201ENST00000612139 90 ntBASIC18.01■□□□□ 0.47
TMEM235A6NFC5 pRNA.11-201ENST00000618423 90 ntBASIC18.01■□□□□ 0.47
TMEM235A6NFC5 pRNA.13-201ENST00000619112 90 ntBASIC18.01■□□□□ 0.47
TMEM235A6NFC5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TMEM235A6NFC5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18■□□□□ 0.47
TMEM235A6NFC5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18■□□□□ 0.47
TMEM235A6NFC5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TMEM235A6NFC5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18■□□□□ 0.47
TMEM235A6NFC5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18■□□□□ 0.47
TMEM235A6NFC5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TMEM235A6NFC5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18■□□□□ 0.47
TMEM235A6NFC5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18■□□□□ 0.47
TMEM235A6NFC5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TMEM235A6NFC5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM235A6NFC5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 AC068587.7-201ENST00000641602 218 ntBASIC17.99■□□□□ 0.47
TMEM235A6NFC5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM235A6NFC5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM235A6NFC5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 AC003102.1-202ENST00000563394 1796 ntBASIC17.97■□□□□ 0.47
TMEM235A6NFC5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM235A6NFC5 AC087239.1-201ENST00000622671 572 ntBASIC17.97■□□□□ 0.47
TMEM235A6NFC5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms