Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HFM1A2PYH4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC31.54■■■□□ 2.64
HFM1A2PYH4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC31.54■■■□□ 2.64
HFM1A2PYH4 AC008175.2-201ENST00000612840 297 ntBASIC31.54■■■□□ 2.64
HFM1A2PYH4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
HFM1A2PYH4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
HFM1A2PYH4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.54■■■□□ 2.64
HFM1A2PYH4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
HFM1A2PYH4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
HFM1A2PYH4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HFM1A2PYH4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HFM1A2PYH4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HFM1A2PYH4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC31.53■■■□□ 2.64
HFM1A2PYH4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.53■■■□□ 2.64
HFM1A2PYH4 AC007322.4-201ENST00000509611 723 ntBASIC31.53■■■□□ 2.64
HFM1A2PYH4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
HFM1A2PYH4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
HFM1A2PYH4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.53■■■□□ 2.64
HFM1A2PYH4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HFM1A2PYH4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HFM1A2PYH4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
HFM1A2PYH4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
HFM1A2PYH4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
HFM1A2PYH4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.52■■■□□ 2.64
HFM1A2PYH4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HFM1A2PYH4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
HFM1A2PYH4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
HFM1A2PYH4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.52■■■□□ 2.64
HFM1A2PYH4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
HFM1A2PYH4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
HFM1A2PYH4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
HFM1A2PYH4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
HFM1A2PYH4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
HFM1A2PYH4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.64
HFM1A2PYH4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.51■■■□□ 2.64
HFM1A2PYH4 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.51■■■□□ 2.64
HFM1A2PYH4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
HFM1A2PYH4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.51■■■□□ 2.63
HFM1A2PYH4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
HFM1A2PYH4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
HFM1A2PYH4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
HFM1A2PYH4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
HFM1A2PYH4 AC231657.2-201ENST00000624556 255 ntBASIC31.5■■■□□ 2.63
HFM1A2PYH4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
HFM1A2PYH4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
HFM1A2PYH4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.5■■■□□ 2.63
HFM1A2PYH4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
HFM1A2PYH4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
HFM1A2PYH4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
HFM1A2PYH4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
HFM1A2PYH4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 AC013268.1-206ENST00000638368 961 ntBASIC31.49■■■□□ 2.63
HFM1A2PYH4 AC112229.1-201ENST00000639295 961 ntBASIC31.49■■■□□ 2.63
HFM1A2PYH4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HFM1A2PYH4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 RBM17P2-201ENST00000616397 1405 ntBASIC31.49■■■□□ 2.63
HFM1A2PYH4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.49■■■□□ 2.63
HFM1A2PYH4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
HFM1A2PYH4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC31.48■■■□□ 2.63
HFM1A2PYH4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.48■■■□□ 2.63
HFM1A2PYH4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
HFM1A2PYH4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HFM1A2PYH4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HFM1A2PYH4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
HFM1A2PYH4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HFM1A2PYH4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC31.47■■■□□ 2.63
HFM1A2PYH4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
HFM1A2PYH4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
HFM1A2PYH4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
HFM1A2PYH4 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.47■■■□□ 2.63
HFM1A2PYH4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.47■■■□□ 2.63
HFM1A2PYH4 AC243732.1-201ENST00000612648 864 ntBASIC31.47■■■□□ 2.63
HFM1A2PYH4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
HFM1A2PYH4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms