Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 SMUG1P1-201ENST00000590640 811 ntBASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 AL136162.1-201ENST00000607711 1078 ntBASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 AC131212.1-201ENST00000613771 668 ntBASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 AP006587.3-201ENST00000525742 1516 ntBASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 AC138932.1-201ENST00000534164 6830 ntBASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 AC233992.3-201ENST00000607491 485 ntBASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAV8-2A0A0B4J237 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV8-2A0A0B4J237 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-2A0A0B4J237 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 AC135279.3-201ENST00000610945 1311 ntBASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-2A0A0B4J237 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms