Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 DUSP5P2-201ENST00000426873 1033 ntBASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 RPS2P52-201ENST00000469610 820 ntBASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC187A0A096LP49 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC187A0A096LP49 AC137767.1-201ENST00000602918 1920 ntBASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 AC098590.1-201ENST00000468126 897 ntBASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC187A0A096LP49 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC187A0A096LP49 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 GCSHP5-201ENST00000443090 522 ntBASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 AC006058.3-201ENST00000606217 1069 ntBASIC20.08■□□□□ 0.81
CCDC187A0A096LP49 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC187A0A096LP49 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC187A0A096LP49 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCDC187A0A096LP49 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC187A0A096LP49 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC187A0A096LP49 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms