Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 AC007216.3-201ENST00000568144 1495 ntBASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 PDZRN3-203ENST00000462146 2927 ntTSL 2 BASIC10.15□□□□□ -0.78
NPIPA3F8WFD2 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 PPHLN1-205ENST00000395568 2170 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 CDKL2-202ENST00000429927 3383 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 AL645820.1-201ENST00000623445 1673 ntBASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 ALDH3A2-202ENST00000339618 3828 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 IQCJ-204ENST00000482126 1408 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 AC009716.2-201ENST00000624840 3765 ntBASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 AC131254.1-201ENST00000507496 1867 ntTSL 2 BASIC10.15□□□□□ -0.79
NPIPA3F8WFD2 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 POM121L6P-201ENST00000441186 1826 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL390205.1-201ENST00000381279 1586 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 SH2D4B-201ENST00000313455 2889 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 LAMTOR1-204ENST00000538404 1346 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 RSPH3-202ENST00000367069 6561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ELP2-204ENST00000423854 2385 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ABRACL-201ENST00000367660 845 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 CA5BP1-203ENST00000380334 1264 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 SETD4-202ENST00000399201 1212 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 SETD4-203ENST00000399205 1208 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL353133.2-201ENST00000402173 411 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL080273.1-201ENST00000414989 535 ntTSL 4 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 MT1P3-201ENST00000421424 177 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL139390.1-201ENST00000423568 517 ntTSL 3 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AP001187.1-201ENST00000428947 411 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 LRRC23-205ENST00000429740 671 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 RPL15P18-201ENST00000432924 612 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ADIPOR1P1-201ENST00000435632 1074 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AOAH-IT1-201ENST00000449672 573 ntTSL 4 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL157902.1-203ENST00000456126 442 ntTSL 3 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC078850.2-201ENST00000487657 482 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL158801.1-201ENST00000488313 348 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC074344.2-201ENST00000502846 565 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC092611.2-201ENST00000508664 304 ntTSL 3 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 OR1X5P-201ENST00000510464 894 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 HINT1-208ENST00000513012 583 ntTSL 4 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AP003390.2-201ENST00000529229 559 ntTSL 4 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC010768.1-201ENST00000533814 543 ntTSL 3 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC084879.1-203ENST00000550470 1257 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 PTTG4P-201ENST00000556391 352 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC125421.1-201ENST00000583854 1140 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AC242842.1-201ENST00000617712 447 ntTSL 3 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 CIDEC-208ENST00000618572 1226 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 AL512310.2-201ENST00000547175 1493 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 LINC02297-201ENST00000548050 1493 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ST13-201ENST00000216218 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 USP14-203ENST00000400266 1681 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 GSTM5-203ENST00000369813 4370 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 PSPN-202ENST00000597721 3911 ntBASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ZWILCH-202ENST00000446801 3256 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 RFX6-201ENST00000332958 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 FAM47E-203ENST00000510197 1624 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 TNFAIP3-201ENST00000237289 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 P4HA3-AS1-201ENST00000502071 2157 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 OC90-201ENST00000254627 1782 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 ZNF57-203ENST00000523428 1774 ntTSL 2 BASIC10.14□□□□□ -0.79
NPIPA3F8WFD2 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 FNDC9-201ENST00000312349 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 F7-206ENST00000541084 2873 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AL355482.1-201ENST00000411509 2463 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 KPRP-201ENST00000606109 2492 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 FBXO48-201ENST00000377957 5666 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SIDT2-220ENST00000628876 2609 ntTSL 5 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 RPH3A-213ENST00000548866 2429 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC092447.1-201ENST00000341855 964 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 KITLG-203ENST00000357116 565 ntTSL 4 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 S100A4-202ENST00000368714 531 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 C11orf65-201ENST00000393084 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SLC44A3-AS1-204ENST00000422162 697 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SPTLC1P4-201ENST00000435997 260 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AL035250.2-201ENST00000440889 620 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AL358613.1-201ENST00000444965 442 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 NPIPB3-202ENST00000448012 1216 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 ZNF277-206ENST00000450657 1075 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms