Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 SUN5-202ENST00000375519 513 ntTSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 KRTAP4-7-201ENST00000391417 992 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 CD83P1-201ENST00000405625 572 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 HMGN1P37-201ENST00000413805 303 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AL117329.2-201ENST00000413815 740 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AL590302.2-201ENST00000435810 1122 ntTSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 LINC00158-203ENST00000440205 740 ntTSL 3 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 LINC01712-201ENST00000446227 1044 ntTSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC138356.3-201ENST00000523507 1228 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 RPL10P13-201ENST00000550757 303 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC005702.1-201ENST00000593015 692 ntTSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC010618.3-204ENST00000615939 751 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC243547.3-202ENST00000625258 192 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 NF2-206ENST00000361676 1716 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 QRSL1-201ENST00000369044 2158 ntTSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AK5-202ENST00000344720 3929 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 PIK3CD-201ENST00000361110 3508 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 TXNRD1-215ENST00000526950 1847 ntTSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 ADAM20P1-201ENST00000320746 2326 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 GDPD2-202ENST00000453994 2438 ntTSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 OR10K1-204ENST00000641460 1965 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 BNC2-210ENST00000545497 3750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 MS4A4A-201ENST00000337908 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 MTERF4-202ENST00000391980 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 BCAR3-204ENST00000370247 2827 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 MTMR11-202ENST00000439741 2827 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 PRRG1-209ENST00000543642 4509 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 MEGF11-202ENST00000395614 3423 ntTSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 RBM23-205ENST00000542016 1743 ntTSL 2 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC026250.1-201ENST00000500698 2311 ntTSL 2 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 SEZ6L2-202ENST00000346932 3015 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 ARMC8-217ENST00000481646 3043 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 PPFIBP2-224ENST00000533792 3003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 NUP58-202ENST00000381736 4332 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 KCNE1-209ENST00000621601 3148 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 HNRNPCL1-201ENST00000317869 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 POLR2J2-201ENST00000333432 348 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 VENTXP2-201ENST00000399480 481 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC017081.1-201ENST00000420063 823 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 LINC01914-201ENST00000427054 640 ntTSL 3 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 CEACAMP2-201ENST00000457904 440 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 RN7SL795P-201ENST00000469617 282 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AP001208.2-201ENST00000519793 578 ntTSL 4 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 SNRPCP5-201ENST00000531775 189 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC034102.6-202ENST00000549438 882 ntTSL 3 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 MIR4673-201ENST00000584777 59 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 RN7SL488P-201ENST00000585186 286 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC093503.2-201ENST00000597609 296 ntTSL 3 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 SEMA4G-212ENST00000613292 1171 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC239859.5-201ENST00000614100 1232 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 POLR2J3-221ENST00000621093 348 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC005943.2-201ENST00000624421 148 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 PCDHB2-205ENST00000625033 519 ntTSL 4 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AC005144.1-201ENST00000637627 703 ntTSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 DHX29-205ENST00000621106 4450 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 MAGEB6-201ENST00000379034 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 CAV1-202ENST00000393467 2628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 SNRNP35-203ENST00000526639 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 R3HDM2-205ENST00000403821 3347 ntTSL 5 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 ADCY4-201ENST00000310677 3415 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 HNRNPKP4-201ENST00000485383 1386 ntBASIC11.75□□□□□ -0.53
LMO3Q8TAP4 AP001189.1-201ENST00000447519 1426 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 ATP8B5P-201ENST00000329395 2869 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 ZFAT-216ENST00000523399 3734 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 SPIB-205ENST00000595883 3791 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LMO3Q8TAP4 ZSCAN29-204ENST00000562072 2345 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 655.8 ms