Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF195-215ENST00000526601 2008 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 NEFM-203ENST00000437366 3148 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 CFAP43-202ENST00000357060 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 RBM28-202ENST00000415472 2251 ntTSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AL136982.1-201ENST00000444431 4560 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 NPHS1-201ENST00000353632 3741 ntTSL 5 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 SLC9A8-202ENST00000417961 6309 ntTSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 HBD-201ENST00000292901 486 ntTSL 3 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 SCP2D1-201ENST00000377428 667 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 TRAV3-201ENST00000390425 519 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 HSPB1-202ENST00000429938 527 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 HNRNPA1P15-201ENST00000444886 960 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 CEACAMP2-201ENST00000457904 440 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 RN7SL240P-201ENST00000485204 286 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 CYP4F44P-201ENST00000520423 412 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 ADIPOR1P2-201ENST00000554199 820 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC009063.3-201ENST00000565904 566 ntTSL 3 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 LINC01570-202ENST00000566218 732 ntTSL 2 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC093802.2-201ENST00000567853 583 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 Metazoa_SRP.51-201ENST00000570437 272 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC067969.1-201ENST00000595853 552 ntTSL 5 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC121758.3-201ENST00000611595 301 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 AC010385.3-201ENST00000614250 162 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 ECSCR-201ENST00000618155 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 LINC01529-207ENST00000637448 810 ntTSL 5 BASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 OR7E22P-202ENST00000641331 1154 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 OR7E22P-203ENST00000641370 1242 ntBASIC10.21□□□□□ -0.77
NPIPA3F8WFD2 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 DMRT1-203ENST00000569227 1385 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 LACC1-203ENST00000441843 4262 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 AC009120.6-201ENST00000616116 1460 ntBASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 FHAD1-202ENST00000358897 5090 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 AP1S2-202ENST00000380291 3492 ntTSL 2 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 SLC26A8-208ENST00000490799 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 AL118505.1-201ENST00000619370 1932 ntBASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 AL078459.1-201ENST00000427819 1950 ntTSL 2 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 ZCCHC11-202ENST00000355809 2152 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 TTC23-204ENST00000394135 2496 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
NPIPA3F8WFD2 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 TGM5-202ENST00000349114 1958 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 PARD3B-202ENST00000351153 3411 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 OLFML2B-203ENST00000367940 2685 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 DEFA1-201ENST00000382679 406 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 VENTXP2-201ENST00000399480 481 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 FAM197Y10-201ENST00000425318 520 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 HNRNPA1P35-201ENST00000429216 963 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 GAMTP2-201ENST00000430917 463 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 PRAC2-202ENST00000432056 504 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 LINC01716-201ENST00000434176 698 ntTSL 3 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AL358176.5-201ENST00000442611 385 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 RPL15-210ENST00000456530 2835 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AP000926.2-201ENST00000469983 358 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AC068620.1-201ENST00000470544 798 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 DEDD-210ENST00000490843 1527 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 MME-212ENST00000493237 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AC138965.2-201ENST00000502813 568 ntTSL 4 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ZNF859P-201ENST00000502859 1966 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 IGHV1-17-201ENST00000520119 334 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ZFAND1-219ENST00000522520 1705 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 FAM86B3P-202ENST00000522601 1409 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 AC026254.3-201ENST00000584490 322 ntBASIC10.2□□□□□ -0.78
NPIPA3F8WFD2 SAMD4B-206ENST00000596368 1176 ntTSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 364.8 ms