Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 AC079598.2-202ENST00000546624 1451 ntBASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01558Q9Y6Z2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01558Q9Y6Z2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 AP000997.3-201ENST00000623333 2250 ntBASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01558Q9Y6Z2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms