Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 AC079140.4-201ENST00000507448 529 ntBASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA6Q9Y5G7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA6Q9Y5G7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA6Q9Y5G7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA6Q9Y5G7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
PCDHGA6Q9Y5G7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.39■□□□□ 0.86
PCDHGA6Q9Y5G7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA6Q9Y5G7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA6Q9Y5G7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA6Q9Y5G7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA6Q9Y5G7 AC009237.3-201ENST00000393279 1427 ntBASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 AC080038.3-201ENST00000623346 1952 ntBASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA6Q9Y5G7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms