Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 AC010542.4-201ENST00000563151 1910 ntBASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHB1Q9Y5F3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB1Q9Y5F3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB1Q9Y5F3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
PCDHB1Q9Y5F3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB1Q9Y5F3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 TPRG1LP1-201ENST00000598702 760 ntBASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHB1Q9Y5F3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PCDHB1Q9Y5F3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB1Q9Y5F3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms