Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KDM3AQ9Y4C1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.95■■□□□ 1.42
KDM3AQ9Y4C1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KDM3AQ9Y4C1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.95■■□□□ 1.42
KDM3AQ9Y4C1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.95■■□□□ 1.42
KDM3AQ9Y4C1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KDM3AQ9Y4C1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 AC055733.4-201ENST00000638462 1354 ntBASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KDM3AQ9Y4C1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 AC137761.2-201ENST00000561729 223 ntBASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 AC145350.3-201ENST00000569033 163 ntBASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.92■■□□□ 1.42
KDM3AQ9Y4C1 FBXW4P1-201ENST00000426721 2239 ntBASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
KDM3AQ9Y4C1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 KRT19P1-201ENST00000405746 1186 ntBASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
KDM3AQ9Y4C1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 AC003102.1-202ENST00000563394 1796 ntBASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 ID1-201ENST00000376105 1233 ntBASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 AC016769.1-201ENST00000409132 1010 ntBASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 RAP2CP1-201ENST00000605103 478 ntBASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 AC080038.1-201ENST00000611274 1154 ntBASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.42
KDM3AQ9Y4C1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KDM3AQ9Y4C1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
KDM3AQ9Y4C1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
KDM3AQ9Y4C1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.89■■□□□ 1.41
KDM3AQ9Y4C1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
KDM3AQ9Y4C1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms