Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC40.53■■■■■ 4.08
SHROOM4Q9ULL8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC40.52■■■■■ 4.08
SHROOM4Q9ULL8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC40.51■■■■■ 4.08
SHROOM4Q9ULL8 AC137767.1-201ENST00000602918 1920 ntBASIC40.51■■■■■ 4.07
SHROOM4Q9ULL8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC40.51■■■■■ 4.07
SHROOM4Q9ULL8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC40.51■■■■■ 4.07
SHROOM4Q9ULL8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC40.51■■■■■ 4.07
SHROOM4Q9ULL8 TERF1P5-201ENST00000477545 1207 ntBASIC40.51■■■■■ 4.07
SHROOM4Q9ULL8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC40.51■■■■■ 4.07
SHROOM4Q9ULL8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
SHROOM4Q9ULL8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
SHROOM4Q9ULL8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC40.5■■■■■ 4.07
SHROOM4Q9ULL8 OR7E47P-201ENST00000546390 1422 ntBASIC40.5■■■■■ 4.07
SHROOM4Q9ULL8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 AC091874.3-201ENST00000512672 1195 ntBASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC40.49■■■■■ 4.07
SHROOM4Q9ULL8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC40.48■■■■■ 4.07
SHROOM4Q9ULL8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 UNC93B5-201ENST00000530315 699 ntBASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 AC016405.3-201ENST00000607710 860 ntBASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 AC073912.3-201ENST00000624414 853 ntBASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC40.47■■■■■ 4.07
SHROOM4Q9ULL8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 AC026366.1-201ENST00000488803 879 ntBASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
SHROOM4Q9ULL8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 C9orf163-202ENST00000624034 2573 ntBASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 AC069236.1-201ENST00000604339 616 ntBASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC40.45■■■■■ 4.07
SHROOM4Q9ULL8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 FAM210CP-201ENST00000445714 574 ntBASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
SHROOM4Q9ULL8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC40.43■■■■■ 4.06
SHROOM4Q9ULL8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
SHROOM4Q9ULL8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC40.42■■■■■ 4.06
SHROOM4Q9ULL8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
SHROOM4Q9ULL8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC40.42■■■■■ 4.06
SHROOM4Q9ULL8 AP003097.1-201ENST00000530657 1135 ntBASIC40.42■■■■■ 4.06
SHROOM4Q9ULL8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms