Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NPAP1Q9NZP6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 AL157384.1-201ENST00000445995 2473 ntBASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 AC080038.3-201ENST00000623346 1952 ntBASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPAP1Q9NZP6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAP1Q9NZP6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 AC097381.1-201ENST00000429019 1296 ntBASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 MIR6821-201ENST00000617625 74 ntBASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPAP1Q9NZP6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 AC087623.3-201ENST00000607047 1098 ntBASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NPAP1Q9NZP6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAP1Q9NZP6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
NPAP1Q9NZP6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAP1Q9NZP6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAP1Q9NZP6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms