Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TFCP2L1Q9NZI6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
TFCP2L1Q9NZI6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 C1QBPP2-201ENST00000528754 825 ntBASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 Z99916.2-201ENST00000604037 246 ntBASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.14■■□□□ 1.94
TFCP2L1Q9NZI6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TFCP2L1Q9NZI6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TFCP2L1Q9NZI6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.93
TFCP2L1Q9NZI6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TFCP2L1Q9NZI6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
TFCP2L1Q9NZI6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 SNORA78-201ENST00000459373 127 ntBASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 AL034346.1-201ENST00000568244 1277 ntBASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 OR7E47P-201ENST00000546390 1422 ntBASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 RBM17P2-201ENST00000616397 1405 ntBASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TFCP2L1Q9NZI6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 ABCB10P4-201ENST00000566803 2184 ntBASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 AP006587.3-201ENST00000525742 1516 ntBASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 LINC01023-201ENST00000606054 436 ntBASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TFCP2L1Q9NZI6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TFCP2L1Q9NZI6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 POU5F1P4-201ENST00000413175 1085 ntBASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
TFCP2L1Q9NZI6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 KRT18P21-201ENST00000515767 1272 ntBASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 CYP2T3P-201ENST00000601990 817 ntBASIC27.09■■□□□ 1.93
TFCP2L1Q9NZI6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms