Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.47■□□□□ 0.87
NDE1Q9NXR1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 AC079089.2-201ENST00000531211 1277 ntBASIC20.46■□□□□ 0.87
NDE1Q9NXR1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDE1Q9NXR1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 AL049796.1-201ENST00000565336 1766 ntBASIC20.45■□□□□ 0.86
NDE1Q9NXR1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDE1Q9NXR1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDE1Q9NXR1 OR7E47P-201ENST00000546390 1422 ntBASIC20.44■□□□□ 0.86
NDE1Q9NXR1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 AC026471.6-201ENST00000622954 1905 ntBASIC20.43■□□□□ 0.86
NDE1Q9NXR1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDE1Q9NXR1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.42■□□□□ 0.86
NDE1Q9NXR1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.42■□□□□ 0.86
NDE1Q9NXR1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.41■□□□□ 0.86
NDE1Q9NXR1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms