Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
THUMPD1Q9NXG2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
THUMPD1Q9NXG2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 BX842568.3-201ENST00000418104 571 ntBASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THUMPD1Q9NXG2 AL157384.1-201ENST00000445995 2473 ntBASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THUMPD1Q9NXG2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 AL136116.3-201ENST00000402907 1138 ntBASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
THUMPD1Q9NXG2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
THUMPD1Q9NXG2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THUMPD1Q9NXG2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms