Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 KRT18P14-201ENST00000534205 1250 ntBASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 AC092437.1-201ENST00000624794 1048 ntBASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CUEDC1Q9NWM3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L2-201ENST00000561772 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L6-201ENST00000626483 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L1-201ENST00000627662 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L8-201ENST00000629013 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L3-201ENST00000630187 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L7-201ENST00000630678 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DUX4L5-201ENST00000630834 1275 ntBASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CUEDC1Q9NWM3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 AC079140.4-201ENST00000507448 529 ntBASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CUEDC1Q9NWM3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CUEDC1Q9NWM3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CUEDC1Q9NWM3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms