Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RBM28Q9NW13 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.65■■□□□ 1.54
RBM28Q9NW13 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 MIR935-201ENST00000401179 91 ntBASIC24.65■■□□□ 1.54
RBM28Q9NW13 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.65■■□□□ 1.54
RBM28Q9NW13 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.65■■□□□ 1.54
RBM28Q9NW13 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RBM28Q9NW13 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RBM28Q9NW13 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.65■■□□□ 1.54
RBM28Q9NW13 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RBM28Q9NW13 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RBM28Q9NW13 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RBM28Q9NW13 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RBM28Q9NW13 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RBM28Q9NW13 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.64■■□□□ 1.54
RBM28Q9NW13 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
RBM28Q9NW13 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.64■■□□□ 1.53
RBM28Q9NW13 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.64■■□□□ 1.53
RBM28Q9NW13 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RBM28Q9NW13 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.63■■□□□ 1.53
RBM28Q9NW13 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.63■■□□□ 1.53
RBM28Q9NW13 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RBM28Q9NW13 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.63■■□□□ 1.53
RBM28Q9NW13 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.63■■□□□ 1.53
RBM28Q9NW13 MIR5787-201ENST00000611784 55 ntBASIC24.63■■□□□ 1.53
RBM28Q9NW13 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.63■■□□□ 1.53
RBM28Q9NW13 AP004607.4-201ENST00000530158 1459 ntBASIC24.63■■□□□ 1.53
RBM28Q9NW13 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.63■■□□□ 1.53
RBM28Q9NW13 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RBM28Q9NW13 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RBM28Q9NW13 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RBM28Q9NW13 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.62■■□□□ 1.53
RBM28Q9NW13 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RBM28Q9NW13 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RBM28Q9NW13 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RBM28Q9NW13 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.62■■□□□ 1.53
RBM28Q9NW13 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RBM28Q9NW13 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.62■■□□□ 1.53
RBM28Q9NW13 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.62■■□□□ 1.53
RBM28Q9NW13 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RBM28Q9NW13 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 AC004854.2-201ENST00000608450 1441 ntBASIC24.61■■□□□ 1.53
RBM28Q9NW13 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.61■■□□□ 1.53
RBM28Q9NW13 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.61■■□□□ 1.53
RBM28Q9NW13 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.61■■□□□ 1.53
RBM28Q9NW13 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RBM28Q9NW13 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RBM28Q9NW13 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RBM28Q9NW13 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RBM28Q9NW13 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RBM28Q9NW13 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.6■■□□□ 1.53
RBM28Q9NW13 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RBM28Q9NW13 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RBM28Q9NW13 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RBM28Q9NW13 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RBM28Q9NW13 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RBM28Q9NW13 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RBM28Q9NW13 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.59■■□□□ 1.53
RBM28Q9NW13 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.59■■□□□ 1.53
RBM28Q9NW13 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.59■■□□□ 1.53
RBM28Q9NW13 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.59■■□□□ 1.53
RBM28Q9NW13 AC138907.5-202ENST00000569484 235 ntBASIC24.59■■□□□ 1.53
RBM28Q9NW13 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
RBM28Q9NW13 NTF6G-201ENST00000591094 616 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms