Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C12orf4Q9NQ89 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C12orf4Q9NQ89 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 MIR4787-201ENST00000607364 84 ntBASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 AC026310.3-201ENST00000625186 2373 ntBASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C12orf4Q9NQ89 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 AC010997.5-201ENST00000609182 354 ntBASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf4Q9NQ89 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C12orf4Q9NQ89 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
C12orf4Q9NQ89 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
C12orf4Q9NQ89 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf4Q9NQ89 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
C12orf4Q9NQ89 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf4Q9NQ89 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf4Q9NQ89 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf4Q9NQ89 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms