Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4BQ9NPR2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4BQ9NPR2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA4BQ9NPR2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SEMA4BQ9NPR2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 MIR638-201ENST00000385237 100 ntBASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4BQ9NPR2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 AC019069.1-201ENST00000610008 1333 ntBASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.69■□□□□ 0.9
SEMA4BQ9NPR2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 SMUG1P1-201ENST00000590640 811 ntBASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 AC233992.3-201ENST00000607491 485 ntBASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 AP006587.3-201ENST00000525742 1516 ntBASIC20.68■□□□□ 0.9
SEMA4BQ9NPR2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 AC126544.1-201ENST00000580842 1059 ntBASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 AC135279.3-201ENST00000610945 1311 ntBASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4BQ9NPR2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4BQ9NPR2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4BQ9NPR2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms