Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RANBP3Q9H6Z4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RANBP3Q9H6Z4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RANBP3Q9H6Z4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.33■□□□□ 0.53
RANBP3Q9H6Z4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RANBP3Q9H6Z4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.33■□□□□ 0.53
RANBP3Q9H6Z4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RANBP3Q9H6Z4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 AL139246.5-201ENST00000606645 996 ntBASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
RANBP3Q9H6Z4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 Z98882.1-201ENST00000622160 2253 ntBASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 AL512631.2-201ENST00000604634 923 ntBASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.32■□□□□ 0.52
RANBP3Q9H6Z4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RANBP3Q9H6Z4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 FEM1AP1-201ENST00000431297 1995 ntBASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RANBP3Q9H6Z4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms