Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 AC008764.7-201ENST00000593779 1081 ntBASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NUCKS1Q9H1E3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 SLC47A1P1-202ENST00000449666 945 ntBASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NUCKS1Q9H1E3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 AC027682.1-201ENST00000562846 899 ntBASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NUCKS1Q9H1E3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 AC099791.1-201ENST00000416440 715 ntBASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 BX842568.3-201ENST00000418104 571 ntBASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 AC091305.1-201ENST00000479476 895 ntBASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NUCKS1Q9H1E3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.89■■□□□ 1.26
NUCKS1Q9H1E3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NUCKS1Q9H1E3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
NUCKS1Q9H1E3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NUCKS1Q9H1E3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
NUCKS1Q9H1E3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NUCKS1Q9H1E3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 AC233992.3-201ENST00000607491 485 ntBASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NUCKS1Q9H1E3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 AL049796.1-201ENST00000565336 1766 ntBASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 RASA4CP-201ENST00000424092 1398 ntBASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NUCKS1Q9H1E3 AP006587.3-201ENST00000525742 1516 ntBASIC22.87■■□□□ 1.25
NUCKS1Q9H1E3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms