Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 AC097658.1-201ENST00000475555 843 ntBASIC20.22■□□□□ 0.83
STRADBQ9C0K7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
STRADBQ9C0K7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
STRADBQ9C0K7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
STRADBQ9C0K7 AC137767.1-201ENST00000602918 1920 ntBASIC20.19■□□□□ 0.82
STRADBQ9C0K7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
STRADBQ9C0K7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 AC093827.2-201ENST00000512654 315 ntBASIC20.18■□□□□ 0.82
STRADBQ9C0K7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 AC008687.6-201ENST00000596318 630 ntBASIC20.18■□□□□ 0.82
STRADBQ9C0K7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 RBM17P2-201ENST00000616397 1405 ntBASIC20.18■□□□□ 0.82
STRADBQ9C0K7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
STRADBQ9C0K7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 AC243732.1-201ENST00000612648 864 ntBASIC20.17■□□□□ 0.82
STRADBQ9C0K7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
STRADBQ9C0K7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STRADBQ9C0K7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms