Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AC233723.2-201ENST00000623798 2106 ntBASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 MYCNOS-205ENST00000641950 531 ntBASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 AC061975.6-201ENST00000579045 1553 ntBASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC7.23□□□□□ -1.25
KRTAP4-3Q9BYR4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 NCF1B-203ENST00000435988 1254 ntBASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 GUSBP6-202ENST00000438529 1198 ntBASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 AC010141.2-201ENST00000452426 721 ntBASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 AC083906.2-201ENST00000511578 360 ntBASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 FAM99A-202ENST00000538190 1989 ntBASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC7.22□□□□□ -1.25
KRTAP4-3Q9BYR4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 GAS2L1P2-201ENST00000436355 1356 ntBASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
KRTAP4-3Q9BYR4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms