Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 AC243732.1-201ENST00000612648 864 ntBASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTFDC1Q9BY42 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 AP006294.2-201ENST00000641667 209 ntBASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTFDC1Q9BY42 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTFDC1Q9BY42 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
RTFDC1Q9BY42 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
RTFDC1Q9BY42 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.95■■□□□ 1.75
RTFDC1Q9BY42 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RTFDC1Q9BY42 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 AC128676.1-201ENST00000454392 318 ntBASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTFDC1Q9BY42 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 AC137767.1-201ENST00000602918 1920 ntBASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 AC006058.3-201ENST00000606217 1069 ntBASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTFDC1Q9BY42 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTFDC1Q9BY42 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTFDC1Q9BY42 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms