Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LRFN3Q9BTN0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 KRT126P-201ENST00000549467 1181 ntBASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 AC120498.10-201ENST00000621827 505 ntBASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN3Q9BTN0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 AC087388.1-201ENST00000571370 1112 ntBASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 AC053503.5-201ENST00000601508 636 ntBASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 AC124016.1-201ENST00000609552 612 ntBASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 MIR6786-201ENST00000616843 113 ntBASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN3Q9BTN0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 AC145285.6-201ENST00000604632 637 ntBASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.47■■□□□ 1.03
LRFN3Q9BTN0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 AC133681.1-201ENST00000465482 601 ntBASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LRFN3Q9BTN0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.45■■□□□ 1.03
LRFN3Q9BTN0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 KRT18P57-201ENST00000443599 1254 ntBASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 RBM17P2-201ENST00000616397 1405 ntBASIC21.45■■□□□ 1.02
LRFN3Q9BTN0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRFN3Q9BTN0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms