Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXC2Q99958 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
FOXC2Q99958 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.92■□□□□ 0.46
FOXC2Q99958 AL591742.1-201ENST00000604433 565 ntBASIC17.92■□□□□ 0.46
FOXC2Q99958 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXC2Q99958 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXC2Q99958 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXC2Q99958 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXC2Q99958 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
FOXC2Q99958 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXC2Q99958 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXC2Q99958 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
FOXC2Q99958 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
FOXC2Q99958 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.91■□□□□ 0.46
FOXC2Q99958 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXC2Q99958 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.91■□□□□ 0.46
FOXC2Q99958 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
FOXC2Q99958 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
FOXC2Q99958 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXC2Q99958 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 AP004607.7-201ENST00000527152 1677 ntBASIC17.9■□□□□ 0.46
FOXC2Q99958 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
FOXC2Q99958 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXC2Q99958 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.9■□□□□ 0.46
FOXC2Q99958 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXC2Q99958 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXC2Q99958 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
FOXC2Q99958 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
FOXC2Q99958 AC008175.2-201ENST00000612840 297 ntBASIC17.9■□□□□ 0.46
FOXC2Q99958 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXC2Q99958 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXC2Q99958 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXC2Q99958 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
FOXC2Q99958 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXC2Q99958 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXC2Q99958 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXC2Q99958 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXC2Q99958 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXC2Q99958 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXC2Q99958 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
FOXC2Q99958 LSM12P1-201ENST00000411836 588 ntBASIC17.89■□□□□ 0.45
FOXC2Q99958 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXC2Q99958 RPPH1-201ENST00000516869 333 ntBASIC17.89■□□□□ 0.45
FOXC2Q99958 AC079089.2-201ENST00000531211 1277 ntBASIC17.89■□□□□ 0.45
FOXC2Q99958 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXC2Q99958 AL034346.1-201ENST00000568244 1277 ntBASIC17.89■□□□□ 0.45
FOXC2Q99958 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXC2Q99958 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXC2Q99958 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXC2Q99958 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXC2Q99958 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXC2Q99958 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXC2Q99958 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXC2Q99958 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXC2Q99958 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
FOXC2Q99958 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXC2Q99958 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXC2Q99958 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.88■□□□□ 0.45
FOXC2Q99958 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXC2Q99958 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXC2Q99958 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXC2Q99958 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXC2Q99958 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.88■□□□□ 0.45
FOXC2Q99958 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXC2Q99958 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXC2Q99958 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXC2Q99958 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXC2Q99958 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms