Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 RAP2CP1-202ENST00000605179 643 ntBASIC19.95■□□□□ 0.78
NR1H4Q96RI1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NR1H4Q96RI1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
NR1H4Q96RI1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.92■□□□□ 0.78
NR1H4Q96RI1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 LETM1P2-201ENST00000597330 2178 ntBASIC19.92■□□□□ 0.78
NR1H4Q96RI1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 AL049796.1-201ENST00000565336 1766 ntBASIC19.92■□□□□ 0.78
NR1H4Q96RI1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR1H4Q96RI1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 AC026471.1-201ENST00000564629 3026 ntBASIC19.91■□□□□ 0.78
NR1H4Q96RI1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 AC133552.2-201ENST00000619106 1032 ntBASIC19.91■□□□□ 0.78
NR1H4Q96RI1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NR1H4Q96RI1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR1H4Q96RI1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms