Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 PBX2P1-201ENST00000493219 1291 ntBASIC19.23■□□□□ 0.67
SNX18Q96RF0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX18Q96RF0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SNX18Q96RF0 AC011298.3-201ENST00000615796 283 ntBASIC19.22■□□□□ 0.67
SNX18Q96RF0 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX18Q96RF0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX18Q96RF0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX18Q96RF0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX18Q96RF0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX18Q96RF0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX18Q96RF0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX18Q96RF0 OXCT2P1-201ENST00000447263 1535 ntBASIC19.21■□□□□ 0.67
SNX18Q96RF0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX18Q96RF0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX18Q96RF0 SYT6-210ENST00000641643 1587 ntBASIC19.21■□□□□ 0.67
SNX18Q96RF0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNX18Q96RF0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX18Q96RF0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX18Q96RF0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX18Q96RF0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX18Q96RF0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 UNC93B3-201ENST00000308076 687 ntBASIC19.2■□□□□ 0.66
SNX18Q96RF0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 AC136469.2-201ENST00000623944 1028 ntBASIC19.2■□□□□ 0.66
SNX18Q96RF0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNX18Q96RF0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX18Q96RF0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 SERBP1P1-201ENST00000396021 1160 ntBASIC19.19■□□□□ 0.66
SNX18Q96RF0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 AP005435.1-201ENST00000529293 1178 ntBASIC19.19■□□□□ 0.66
SNX18Q96RF0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 AC133561.4-201ENST00000566112 224 ntBASIC19.19■□□□□ 0.66
SNX18Q96RF0 AL136162.1-201ENST00000607711 1078 ntBASIC19.19■□□□□ 0.66
SNX18Q96RF0 AC106739.1-201ENST00000617035 715 ntBASIC19.19■□□□□ 0.66
SNX18Q96RF0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX18Q96RF0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX18Q96RF0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 AL034346.1-201ENST00000568244 1277 ntBASIC19.18■□□□□ 0.66
SNX18Q96RF0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.18■□□□□ 0.66
SNX18Q96RF0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX18Q96RF0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX18Q96RF0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX18Q96RF0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX18Q96RF0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SNX18Q96RF0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX18Q96RF0 AC010525.1-201ENST00000585559 441 ntBASIC19.17■□□□□ 0.66
SNX18Q96RF0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX18Q96RF0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SNX18Q96RF0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX18Q96RF0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX18Q96RF0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX18Q96RF0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNX18Q96RF0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.16■□□□□ 0.66
SNX18Q96RF0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX18Q96RF0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX18Q96RF0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX18Q96RF0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms